Basic Information
Locus ID:
Pt_Chr0202196
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 79290593 | 79299140 | + | Pt_Chr0202196 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 78,085.73 Da | 41.75 | 90.23 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 67 | 3.6E-7 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 405 | 687 | 4.2E-41 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 247 | 1.11E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 381 | 687 | 1.2E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 366 | 477 | 1.5E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 254 | 1.6E-49 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 478 | 710 | 1.0E-56 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 401 | 690 | 36.258671 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 96 | 109 | 6.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 163 | 176 | 6.7E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 283 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_051194919.1 | protein STRUBBELIG-RECEPTOR FAMILY 8 [Lolium perenne] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | I1HY60 | Protein kinase domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100845909 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology