Basic Information
Locus ID:
Pt_Chr0202150
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 77257568 | 77264501 | - | Pt_Chr0202150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 65,151.97 Da | 42.89 | 95.60 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 271 | 542 | 2.2E-28 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 70 | 8.7E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 98 | 156 | 6.9E-12 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 220 | 2.55E-25 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 244 | 541 | 1.22E-58 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 232 | 343 | 1.1E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 231 | 2.6E-31 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 344 | 558 | 1.8E-43 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 122 | 143 | 7.44243 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 266 | 546 | 29.036196 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 272 | 295 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_047081263.1 | protein STRUBBELIG-RECEPTOR FAMILY 8-like [Lolium rigidum] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0Q3LMZ1 | Protein kinase domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100823778 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology