Basic Information
Locus ID:
Pt_Chr0202064
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 74088897 | 74096355 | - | Pt_Chr0202064 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.62 | 91,181.38 Da | 104.94 | 41.37 | -1.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 12 | 175 | 3.8E-45 | IPR002130 |
| SUPERFAMILY | SSF50891 | Cyclophilin-like | 5 | 179 | 1.9E-69 | IPR029000 |
| Gene3D | G3DSA:2.40.100.10 | - | 1 | 182 | 5.6E-76 | IPR029000 |
| ProSiteProfiles | PS50072 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 10 | 176 | 41.158009 | IPR002130 |
| ProSitePatterns | PS00170 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 59 | 76 | - | IPR020892 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 27 | 42 | 1.0E-27 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 64 | 76 | 1.0E-27 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 122 | 134 | 1.0E-27 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 107 | 122 | 1.0E-27 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 135 | 150 | 1.0E-27 | IPR002130 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 215 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 507 | 561 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 432 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 685 | 716 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 479 | 499 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 753 | 771 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 815 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 662 | 684 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63400.2 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein. | 0 |
| RefSeq | XP_051194372.1 | peptidyl-prolyl cis-trans isomerase CYP95 isoform X1 [Lolium perenne] | 0 |
| Q9LY75 | Peptidyl-prolyl cis-trans isomerase CYP63 OS=Arabidopsis thaliana OX=3702 GN=CYP63 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7UTQ2 | PPIase cyclophilin-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology