Basic Information
Locus ID:
Pt_Chr0202008
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 71920319 | 71924996 | + | Pt_Chr0202008 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 81,171.08 Da | 47.47 | 78.86 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 22 | 160 | 9.69316E-53 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 432 | 681 | 1.1E-42 | IPR001245 |
| Pfam | PF00582 | Universal stress protein family | 24 | 135 | 2.5E-9 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 24 | 158 | 1.59E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 408 | 681 | 5.93E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 405 | 499 | 2.5E-25 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 10 | 157 | 1.4E-10 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 500 | 713 | 8.0E-49 | - |
| SMART | SM00220 | serkin_6 | 427 | 693 | 4.9E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 427 | 693 | 36.159733 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 545 | 557 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 705 | 727 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 214 | - | - |
| Coils | Coil | Coil | 290 | 324 | - | - |
| Coils | Coil | Coil | 357 | 377 | - | - |
| Coils | Coil | Coil | 383 | 403 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_051194458.1 | U-box domain-containing protein 52-like [Lolium perenne] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0Q3F765 | Protein kinase domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_3g08127v3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology