Basic Information
Locus ID:
Pt_Chr0201951
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 69503850 | 69511940 | + | Pt_Chr0201951 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 75,470.00 Da | 47.44 | 72.94 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 175 | 233 | 1.0E-16 | IPR033443 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 290 | 439 | 1.1E-51 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 521 | 655 | 6.0E-27 | IPR031595 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 184 | 231 | 1.7E-12 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 287 | 497 | 3.0E-89 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 636 | 656 | 1.1E-45 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 498 | 527 | 3.0E-89 | - |
| Gene3D | G3DSA:3.40.50.11980 | - | 528 | 635 | 1.1E-45 | - |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 352 | 386 | 9.941957 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 256 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 167 | 181 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_047081415.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like isoform X1 [Lolium rigidum] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | I1HZH1 | ribonuclease P OS=Brachypodium distachyon OX=15368 GN=BRADI_3g10160v3 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology