Basic Information
Locus ID:
Pt_Chr0201854
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Inositol polyphosphate phosphatase, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 64167810 | 64181028 | - | Pt_Chr0201854 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.80 | 89,466.90 Da | 46.48 | 83.45 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 258 | 641 | 6.0E-11 | IPR005135 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 24 | 232 | 5.86E-15 | IPR036322 |
| SUPERFAMILY | SSF56219 | DNase I-like | 229 | 673 | 1.85E-52 | IPR036691 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 234 | 678 | 1.1E-95 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 37 | 233 | 1.4E-12 | IPR015943 |
| SMART | SM00320 | WD40_4 | 108 | 146 | 14.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 187 | 224 | 70.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 148 | 185 | 10.0 | IPR001680 |
| SMART | SM00128 | i5p_5 | 250 | 656 | 5.0E-67 | IPR000300 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65580.2 | - | 0 |
| RefSeq | XP_020180936.1 | type II inositol polyphosphate 5-phosphatase 15 [Aegilops tauschii subsp. strangulata] | 0 |
| Q84W55 | Type II inositol polyphosphate 5-phosphatase 15 OS=Arabidopsis thaliana OX=3702 GN=IP5P15 PE=1 SV=2 | 0 | |
| TrEMBL | A0A453IHQ4 | IPPc domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology