Basic Information
Locus ID:
Pt_Chr0201554
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
BTB POZ and MATH domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 39985666 | 39989209 | - | Pt_Chr0201554 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 59,766.32 Da | 36.14 | 86.97 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 30 | 157 | 2.11964E-20 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 357 | 468 | 5.3E-24 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 188 | 304 | 3.9E-22 | IPR000210 |
| Pfam | PF00917 | MATH domain | 40 | 158 | 1.3E-7 | IPR002083 |
| SUPERFAMILY | SSF54695 | POZ domain | 177 | 302 | 1.67E-28 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 30 | 160 | 2.62E-21 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 344 | 468 | 4.91E-26 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 475 | 536 | 1.5E-13 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 341 | 466 | 4.9E-32 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 30 | 160 | 4.4E-23 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 164 | 335 | 2.3E-47 | IPR011333 |
| SMART | SM00225 | BTB_4 | 365 | 472 | 3.1E-23 | IPR000210 |
| SMART | SM00225 | BTB_4 | 196 | 305 | 5.3E-20 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 29 | 156 | 15.660584 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 196 | 265 | 16.527964 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 365 | 428 | 17.437971 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 23 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.5 | - | 0 |
| RefSeq | XP_051197250.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium perenne] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NME5 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_020213, gene-QYE76_020220, gene-QYE76_020221 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0201554 |