Basic Information
Locus ID:
Pt_Chr0201487
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 38314915 | 38316045 | - | Pt_Chr0201487 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.25 | 43,161.38 Da | 46.48 | 83.91 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 6 | 37 | 8.9E-5 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 196 | 312 | 8.1E-10 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 4 | 38 | 3.66E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 3 | 46 | 2.5E-6 | - |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 93 | 313 | 1.6E-25 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62660.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_020158312.1 | F-box protein At5g65850-like [Aegilops tauschii subsp. strangulata] | 0 |
| Q9SSQ2 | F-box protein At1g52495 OS=Arabidopsis thaliana OX=3702 GN=At1g52495 PE=4 SV=1 | 0 | |
| TrEMBL | M8D8Y5 | Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology