Basic Information
Locus ID:
Pt_Chr0201211
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 30632563 | 30633765 | - | Pt_Chr0201211 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 44,406.75 Da | 41.95 | 87.28 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 28 | 163 | 1.58029E-18 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 194 | 275 | 7.1E-17 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 181 | 335 | 7.71E-28 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 27 | 170 | 2.45E-27 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 168 | 368 | 1.0E-43 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 28 | 167 | 5.1E-24 | IPR008974 |
| SMART | SM00225 | BTB_4 | 203 | 336 | 3.1E-24 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 203 | 276 | 17.541382 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 27 | 163 | 15.37932 | IPR002083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 299 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_048537904.1 | BTB/POZ and MATH domain-containing protein 2-like [Triticum urartu] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NL26 | Speckle-type POZ protein-like protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0551320.1.CDS1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_013823, gene-QYE76_019885, gene-QYE76_020000 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0201211 |
| Poaceae | Triticum aestivum | 5 | TraesCS6A02G082200.1.cds1, TraesCS6B02G109200.1.cds1 ... |