HalophFGD

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Basic Information
Locus ID: Pt_Chr0201055
Species & Taxonomic ID: Puccinellia tenuiflora & 240906
Genome Assembly: GCA_012064385.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Chr02 26243718 26269273 + Pt_Chr0201055
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.83 191,266.41 Da 53.27 96.12 -0.04
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 1344 1383 0.0024 IPR001810
Pfam PF00646 F-box domain 983 1023 0.01 IPR001810
Pfam PF00646 F-box domain 75 115 0.0046 IPR001810
SUPERFAMILY SSF50965 Galactose oxidase, central domain 1034 1297 2.35E-5 IPR011043
SUPERFAMILY SSF81383 F-box domain 75 132 7.85E-12 IPR036047
SUPERFAMILY SSF81383 F-box domain 972 1048 5.76E-12 IPR036047
SUPERFAMILY SSF81383 F-box domain 1343 1457 4.06E-13 IPR036047
Gene3D G3DSA:1.20.1280.50 - 1341 1379 9.2E-6 -
SMART SM00256 fbox_2 983 1022 2.9 IPR001810
SMART SM00256 fbox_2 75 115 0.29 IPR001810
SMART SM00256 fbox_2 1343 1383 0.6 IPR001810
MobiDBLite mobidb-lite consensus disorder prediction 1317 1333 - -
MobiDBLite mobidb-lite consensus disorder prediction 1317 1336 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_047080872.1 uncharacterized protein LOC124691628 [Lolium rigidum] 0
TrEMBL A0A0D9XHN2 F-box domain-containing protein OS=Leersia perrieri OX=77586 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Plantaginaceae Plantago ovata 1 Pov_00027636
Poaceae Echinochloa crus-galli 26 AH01.2562, AH01.2591, AH01.2597, AH05.2770, AH05.2771 ...
AH09.150, BH01.2897, BH01.2916, BH01.2925, BH03.3339, BH03.3340, BH05.2870, BH08.1494, BH08.1495, BH09.232, CH01.3090, CH01.3112, CH01.3122, CH01.3126, CH01.3141, CH03.3527, CH05.2913, CH07.936, CH09.203, CH09.208, CH09.2699
Poaceae Eleusine coracana subsp. coracana 39 gene-QOZ80_2AG0107940, gene-QOZ80_2AG0107950 ...
gene-QOZ80_2AG0107960, gene-QOZ80_2AG0107970, gene-QOZ80_2AG0118950, gene-QOZ80_2AG0118970, gene-QOZ80_2AG0119680, gene-QOZ80_2AG0119750, gene-QOZ80_2AG0119760, gene-QOZ80_2BG0161560, gene-QOZ80_2BG0161570, gene-QOZ80_2BG0161580, gene-QOZ80_2BG0161590, gene-QOZ80_2BG0161600, gene-QOZ80_2BG0161610, gene-QOZ80_2BG0172790, gene-QOZ80_2BG0173140, gene-QOZ80_2BG0173180, gene-QOZ80_4AG0327120, gene-QOZ80_4BG0359080, gene-QOZ80_5AG0375520, gene-QOZ80_5AG0376210, gene-QOZ80_5AG0376230, gene-QOZ80_5AG0376240, gene-QOZ80_5AG0376260, gene-QOZ80_5AG0382230, gene-QOZ80_5AG0382650, gene-QOZ80_5AG0390310, gene-QOZ80_5BG0422920, gene-QOZ80_5BG0423440, gene-QOZ80_5BG0423450, gene-QOZ80_5BG0423460, gene-QOZ80_5BG0423470, gene-QOZ80_5BG0423480, gene-QOZ80_5BG0429160, gene-QOZ80_5BG0438180, gene-QOZ80_7AG0561800, gene-QOZ80_7BG0595200, gene-QOZ80_8AG0628170
Poaceae Hordeum vulgare 25 HORVU.MOREX.r3.1HG0055250.1.CDS1 ...
HORVU.MOREX.r3.1HG0093820.1, HORVU.MOREX.r3.2HG0128260.1.CDS1, HORVU.MOREX.r3.3HG0229360.1.CDS1, HORVU.MOREX.r3.5HG0495310.1, HORVU.MOREX.r3.5HG0495320.1, HORVU.MOREX.r3.5HG0515390.1, HORVU.MOREX.r3.5HG0523120.1.CDS1, HORVU.MOREX.r3.6HG0540230.1, HORVU.MOREX.r3.6HG0540250.1.CDS1, HORVU.MOREX.r3.6HG0540280.1, HORVU.MOREX.r3.6HG0540390.2, HORVU.MOREX.r3.6HG0547490.1, HORVU.MOREX.r3.6HG0547550.1, HORVU.MOREX.r3.6HG0547690.1.CDS1, HORVU.MOREX.r3.6HG0547720.1, HORVU.MOREX.r3.6HG0548310.1.CDS1, HORVU.MOREX.r3.6HG0548510.1, HORVU.MOREX.r3.6HG0548530.1, HORVU.MOREX.r3.6HG0550310.1, HORVU.MOREX.r3.6HG0550450.1, HORVU.MOREX.r3.6HG0550570.1, HORVU.MOREX.r3.6HG0550700.1, HORVU.MOREX.r3.6HG0550740.1, HORVU.MOREX.r3.6HG0568860.1
Poaceae Lolium multiflorum 92 gene-QYE76_000752, gene-QYE76_000859, gene-QYE76_000860 ...
gene-QYE76_001240, gene-QYE76_003475, gene-QYE76_003977, gene-QYE76_005386, gene-QYE76_006557, gene-QYE76_006923, gene-QYE76_008909, gene-QYE76_010286, gene-QYE76_012399, gene-QYE76_012453, gene-QYE76_013502, gene-QYE76_019292, gene-QYE76_019294, gene-QYE76_019301, gene-QYE76_019420, gene-QYE76_019422, gene-QYE76_019423, gene-QYE76_019424, gene-QYE76_019645, gene-QYE76_019691, gene-QYE76_019693, gene-QYE76_019699, gene-QYE76_019712, gene-QYE76_019717, gene-QYE76_019718, gene-QYE76_019721, gene-QYE76_019728, gene-QYE76_019729, gene-QYE76_019730, gene-QYE76_019733, gene-QYE76_019735, gene-QYE76_019736, gene-QYE76_019737, gene-QYE76_019740, gene-QYE76_019743, gene-QYE76_020257, gene-QYE76_020603, gene-QYE76_020624, gene-QYE76_020725, gene-QYE76_021361, gene-QYE76_024521, gene-QYE76_025786, gene-QYE76_025800, gene-QYE76_027268, gene-QYE76_029345, gene-QYE76_035824, gene-QYE76_036699, gene-QYE76_039318, gene-QYE76_039755, gene-QYE76_039911, gene-QYE76_039917, gene-QYE76_043927, gene-QYE76_046998, gene-QYE76_049342, gene-QYE76_049346, gene-QYE76_049365, gene-QYE76_049422, gene-QYE76_049424, gene-QYE76_049425, gene-QYE76_049427, gene-QYE76_049430, gene-QYE76_049697, gene-QYE76_049715, gene-QYE76_049894, gene-QYE76_051216, gene-QYE76_051225, gene-QYE76_051226, gene-QYE76_051269, gene-QYE76_052014, gene-QYE76_052016, gene-QYE76_052017, gene-QYE76_052023, gene-QYE76_052029, gene-QYE76_052750, gene-QYE76_052751, gene-QYE76_054890, gene-QYE76_054891, gene-QYE76_054893, gene-QYE76_054894, gene-QYE76_054917, gene-QYE76_054920, gene-QYE76_055565, gene-QYE76_056687, gene-QYE76_056871, gene-QYE76_060038, gene-QYE76_062322, gene-QYE76_062325, gene-QYE76_063252, gene-QYE76_066332
Poaceae Oryza coarctata 15 Oco03G006820, Oco03G006830, Oco04G007110, Oco13G000770 ...
Oco14G010750, Oco14G012670, Oco19G000640, Oco19G000650, Oco19G000900, Oco20G000660, Oco20G000700, Oco20G000720, Oco20G000740, Oco20G000800, Oco20G001050
Poaceae Oryza sativa 23 LOC_Os02g15160.1, LOC_Os05g25580.1, LOC_Os10g04690.1 ...
LOC_Os10g04700.2, LOC_Os10g04750.1, LOC_Os10g04770.1, LOC_Os10g04780.1, LOC_Os10g04850.1, LOC_Os10g04950.1, LOC_Os10g04980.1, LOC_Os10g05000.1, LOC_Os10g05010.1, LOC_Os10g05200.1, LOC_Os10g05210.1, LOC_Os10g05240.1, LOC_Os10g05520.1, LOC_Os10g05530.1, LOC_Os10g05540.1, LOC_Os10g05590.1, LOC_Os10g06700.1, LOC_Os10g10980.1, LOC_Os11g06580.1, LOC_Os11g38840.1
Poaceae Paspalum vaginatum 22 gene-BS78_01G260300, gene-BS78_01G262200, gene-BS78_K013100 ...
gene-BS78_01G262800, gene-BS78_04G135300, gene-BS78_05G031300, gene-BS78_05G217400, gene-BS78_05G218100, gene-BS78_06G189900, gene-BS78_07G121200, gene-BS78_07G121300, gene-BS78_09G117300, gene-BS78_09G117600, gene-BS78_10G242600, gene-BS78_K169300, gene-BS78_K169400, gene-BS78_K169600, gene-BS78_K288200, gene-BS78_K288300, gene-BS78_K288400, gene-BS78_K288600, gene-BS78_K288700
Poaceae Puccinellia tenuiflora 48 Pt_Chr0104540, Pt_Chr0106656, Pt_Chr0200641, Pt_Chr0200881 ...
Pt_Chr0200895, Pt_Chr0200901, Pt_Chr0200962, Pt_Chr0201007, Pt_Chr0201016, Pt_Chr0201033, Pt_Chr0201036, Pt_Chr0201039, Pt_Chr0201040, Pt_Chr0201046, Pt_Chr0201047, Pt_Chr0201052, Pt_Chr0201053, Pt_Chr0201055, Pt_Chr0201056, Pt_Chr0201091, Pt_Chr0201176, Pt_Chr0202832, Pt_Chr0202835, Pt_Chr0202838, Pt_Chr0203214, Pt_Chr0205583, Pt_Chr0205584, Pt_Chr0205590, Pt_Chr0205677, Pt_Chr0205678, Pt_Chr0205680, Pt_Chr0206019, Pt_Chr0207040, Pt_Chr0207245, Pt_Chr0207254, Pt_Chr0207257, Pt_Chr0207260, Pt_Chr0207262, Pt_Chr0300256, Pt_Chr0306278, Pt_Chr0307507, Pt_Chr0601161, Pt_Chr0601174, Pt_Chr0601306, Pt_Chr0700541, Pt_Chr0704770, Pt_Chr0705000, Pt_Chr0705263
Poaceae Sporobolus alterniflorus 11 Chr01G021990, Chr02G022660, Chr04G022830, Chr05G013540 ...
Chr06G024620, Chr13G022370, Chr18G007030, Chr22G010300, Chr25G016010, Chr25G016020, Chr25G016030
Poaceae Thinopyrum elongatum 62 Tel1E01G353200, Tel1E01G728200, Tel2E01G1037700 ...
Tel3E01G026300, Tel3E01G028500, Tel3E01G028600, Tel3E01G119300, Tel3E01G119500, Tel3E01G120400, Tel3E01G136700, Tel3E01G136900, Tel3E01G565700, Tel3E01G702500, Tel3E01G702800, Tel3E01G704100, Tel3E01G913900, Tel5E01G108300, Tel5E01G108600, Tel5E01G650000, Tel6E01G033400, Tel6E01G034900, Tel6E01G035400, Tel6E01G042700, Tel6E01G102100, Tel6E01G136900, Tel6E01G137000, Tel6E01G137500, Tel6E01G139500, Tel6E01G139900, Tel6E01G142300, Tel6E01G143000, Tel6E01G143200, Tel6E01G144500, Tel6E01G147100, Tel6E01G147500, Tel6E01G152500, Tel6E01G154200, Tel6E01G154300, Tel6E01G154700, Tel6E01G155200, Tel6E01G155500, Tel6E01G155600, Tel6E01G155700, Tel6E01G157200, Tel6E01G169800, Tel6E01G170500, Tel6E01G170700, Tel6E01G171600, Tel6E01G174200, Tel6E01G176000, Tel6E01G176100, Tel6E01G176200, Tel6E01G176400, Tel6E01G178000, Tel6E01G178500, Tel6E01G179000, Tel6E01G179900, Tel6E01G752200, Tel6E01G752300, Tel7E01G174500, Tel7E01G854100, Telscf55701G000100
Poaceae Triticum dicoccoides 34 gene_TRIDC1AG030950, gene_TRIDC1AG045240 ...
gene_TRIDC1AG063250, gene_TRIDC1BG036420, gene_TRIDC1BG072540, gene_TRIDC2AG003470, gene_TRIDC2BG026970, gene_TRIDC3AG050840, gene_TRIDC3BG012610, gene_TRIDC3BG057250, gene_TRIDC3BG070590, gene_TRIDC4AG049780, gene_TRIDC5AG044160, gene_TRIDC5BG048100, gene_TRIDC5BG064490, gene_TRIDC6AG000820, gene_TRIDC6AG000900, gene_TRIDC6AG007830, gene_TRIDC6AG007870, gene_TRIDC6AG008020, gene_TRIDC6AG009290, gene_TRIDC6AG009490, gene_TRIDC6AG022290, gene_TRIDC6BG001370, gene_TRIDC6BG001560, gene_TRIDC6BG001650, gene_TRIDC6BG009920, gene_TRIDC6BG009930, gene_TRIDC6BG009970, gene_TRIDC6BG009990, gene_TRIDC6BG010110, gene_TRIDC6BG011200, gene_TRIDC6BG011500, gene_TRIDC6BG014220
Poaceae Triticum aestivum 210 TraesCS1A02G063400.1, TraesCS1A02G205000.1.cds1 ...
TraesCS1A02G283700.2, TraesCS1A02G431000.1, TraesCS1B02G218600.1.cds1, TraesCS1B02G292900.2, TraesCS1B02G465800.1, TraesCS1D02G208300.1.cds1, TraesCS1D02G282800.1, TraesCS1D02G440200.1, TraesCS2A02G032900.1.cds1, TraesCS2A02G083800.1, TraesCS2A02G180500.2, TraesCS2A02G181100.1, TraesCS2B02G098000.1, TraesCS2B02G098300.1, TraesCS2B02G206600.1, TraesCS2B02G207300.1, TraesCS2B02G207700.1, TraesCS2D02G081800.1.cds1, TraesCS2D02G114000.1.cds1, TraesCS2D02G188900.1, TraesCS2D02G189000.1, TraesCS3A02G015700.1.cds1, TraesCS3A02G015900.1.cds1, TraesCS3A02G063100.1.cds1, TraesCS3A02G063500.1.cds1, TraesCS3A02G064000.1.cds1, TraesCS3A02G064200.1, TraesCS3A02G075300.1, TraesCS3A02G353100.1, TraesCS3A02G445100.1, TraesCS3A02G445700.1, TraesCS3A02G445800.1, TraesCS3A02G446100.1, TraesCS3B02G075200.1, TraesCS3B02G075400.1, TraesCS3B02G076200.1.cds1, TraesCS3B02G076400.1, TraesCS3B02G076500.1, TraesCS3B02G076600.1, TraesCS3B02G076700.1, TraesCS3B02G076800.1, TraesCS3B02G089200.2, TraesCS3B02G385800.1, TraesCS3B02G479700.1, TraesCS3B02G479800.1, TraesCS3B02G480400.1.cds1, TraesCS3B02G480500.1, TraesCS3B02G480600.1, TraesCS3B02G480700.1.cds1, TraesCS3B02G481200.1, TraesCS3D02G013100.1, TraesCS3D02G013200.1.cds1, TraesCS3D02G062800.1.cds1, TraesCS3D02G063200.1.cds1, TraesCS3D02G063500.1, TraesCS3D02G063900.1, TraesCS3D02G064600.1, TraesCS3D02G075300.1, TraesCS3D02G347200.1, TraesCS3D02G437700.1, TraesCS3D02G437800.1, TraesCS3D02G437900.1, TraesCS4A02G309100.1, TraesCS4B02G004100.1, TraesCS4D02G005200.1, TraesCS5B02G052200.1, TraesCS5B02G294300.1, TraesCS5B02G544300.1, TraesCS5D02G057900.1, TraesCS5D02G058300.1, TraesCS5D02G302500.1.cds1, TraesCS6A02G006600.1, TraesCS6A02G006700.1.cds1, TraesCS6A02G006800.1, TraesCS6A02G007500.1, TraesCS6A02G007600.1, TraesCS6A02G007700.2, TraesCS6A02G008200.1, TraesCS6A02G027100.1, TraesCS6A02G039700.1, TraesCS6A02G054300.1, TraesCS6A02G057000.1, TraesCS6A02G057500.1, TraesCS6A02G057600.1, TraesCS6A02G057800.1, TraesCS6A02G058100.1, TraesCS6A02G061800.1, TraesCS6A02G062100.1, TraesCS6A02G062200.1, TraesCS6A02G062500.1, TraesCS6A02G063700.1, TraesCS6A02G064000.1, TraesCS6A02G072900.1.cds1, TraesCS6A02G073100.1.cds1, TraesCS6A02G073200.1.cds1, TraesCS6A02G073500.1, TraesCS6A02G075600.1, TraesCS6A02G075800.1.cds1, TraesCS6A02G076400.2, TraesCS6A02G077100.1, TraesCS6A02G077200.1.cds1, TraesCS6A02G307000.1.cds1, TraesCS6A02G408500.1, TraesCS6B02G012600.1, TraesCS6B02G013700.9, TraesCS6B02G014100.1, TraesCS6B02G067400.1, TraesCS6B02G067900.1.cds1, TraesCS6B02G074400.1, TraesCS6B02G074500.2, TraesCS6B02G074600.1, TraesCS6B02G074700.1, TraesCS6B02G074900.1, TraesCS6B02G075000.1, TraesCS6B02G075400.1, TraesCS6B02G077700.1, TraesCS6B02G083000.3, TraesCS6B02G083300.1, TraesCS6B02G083400.1, TraesCS6B02G083600.1, TraesCS6B02G083700.1.cds1, TraesCS6B02G083800.1, TraesCS6B02G084600.1, TraesCS6B02G085300.2, TraesCS6B02G086000.1, TraesCS6B02G087900.1, TraesCS6B02G098000.1.cds1, TraesCS6B02G098100.1, TraesCS6B02G098200.1, TraesCS6B02G098500.1.cds1, TraesCS6B02G098600.1, TraesCS6B02G100500.1, TraesCS6B02G100600.1, TraesCS6B02G100900.1.cds1, TraesCS6B02G101100.1.cds1, TraesCS6B02G101200.1, TraesCS6B02G101600.1, TraesCS6B02G102400.1, TraesCS6B02G103100.1, TraesCS6B02G103400.1.cds1, TraesCS6B02G103600.1, TraesCS6B02G103700.1.cds1, TraesCS6B02G377900.1, TraesCS6B02G454700.1.cds1, TraesCS6D02G010000.1, TraesCS6D02G011000.1, TraesCS6D02G011800.1, TraesCS6D02G012000.1, TraesCS6D02G012800.1, TraesCS6D02G030900.1, TraesCS6D02G055700.1.cds1, TraesCS6D02G056400.1.cds1, TraesCS6D02G057500.1, TraesCS6D02G058000.1, TraesCS6D02G058100.1.cds1, TraesCS6D02G058400.1.cds1, TraesCS6D02G058500.1, TraesCS6D02G058800.1, TraesCS6D02G059000.1, TraesCS6D02G060800.1, TraesCS6D02G061100.1, TraesCS6D02G062400.1, TraesCS6D02G062600.1, TraesCS6D02G063500.1, TraesCS6D02G070700.1, TraesCS6D02G070800.2, TraesCS6D02G071300.1, TraesCS6D02G071500.1, TraesCS6D02G071900.1, TraesCS6D02G364000.1.cds1, TraesCS6D02G392400.1.cds1, TraesCS7A02G565300.1.cds1, TraesCS7A02G567100.1, TraesCS7B02G041300.1, TraesCS7B02G303500.1, TraesCS7B02G494400.1, TraesCS7B02G494800.1.cds1, TraesCS7B02G497800.1.cds1, TraesCS7B02G498200.1.cds1, TraesCS7B02G498500.1.cds1, TraesCS7D02G077500.1, TraesCS7D02G141000.1, TraesCS7D02G544400.1, TraesCSU02G025900.1, TraesCSU02G026300.1, TraesCSU02G026700.1, TraesCSU02G026900.1.cds1, TraesCSU02G027000.1, TraesCSU02G027500.1, TraesCSU02G027800.2, TraesCSU02G028000.1, TraesCSU02G028800.1, TraesCSU02G029200.1.cds1, TraesCSU02G056500.1.cds1, TraesCSU02G066800.1, TraesCSU02G066900.1, TraesCSU02G078500.1, TraesCSU02G110000.1, TraesCSU02G118200.1, TraesCSU02G119000.1, TraesCSU02G119100.1, TraesCSU02G120400.1, TraesCSU02G133400.1.cds1, TraesCSU02G133500.1.cds1, TraesCSU02G133800.1, TraesCSU02G141700.1, TraesCSU02G193700.1, TraesCSU02G235100.1.cds1
Poaceae Zea mays 2 Zm00001eb285670_P001, Zm00001eb346560_P001
Poaceae Zoysia japonica 5 nbis-gene-34195, nbis-gene-39366, nbis-gene-42294 ...
nbis-gene-43021, nbis-gene-43033
Poaceae Zoysia macrostachya 5 Zma_g13023, Zma_g13062, Zma_g15396, Zma_g15832, Zma_g19281
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.