Basic Information
Locus ID:
Pt_Chr0200958
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the class-I aminoacyl-tRNA synthetase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 23741119 | 23741626 | + | Pt_Chr0200958 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.82 | 15,298.45 Da | 41.58 | 89.48 | -0.25 |
Protein Domain:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_047063250.1 | putative F-box/FBD/LRR-repeat protein At3g49030 [Lolium rigidum] | 0 |
| TrEMBL | A0A3B6QCF6 | FBD domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0157570.1 |
| Poaceae | Lolium multiflorum | 5 | gene-QYE76_046405, gene-QYE76_047771, gene-QYE76_053565 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0200958, Pt_Chr0301212 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G187800 |
| Poaceae | Triticum dicoccoides | 5 | gene_TRIDC6AG004620, gene_TRIDC6AG010050 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS6A02G038800.2, TraesCS6A02G082700.1 ... |