HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Pt_Chr0200951
Species & Taxonomic ID: Puccinellia tenuiflora & 240906
Genome Assembly: GCA_012064385.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Chr02 23428384 23428845 + Pt_Chr0200951
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.10 16,424.65 Da 48.53 89.94 0.26
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 7 52 2.09E-6 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_047049687.1 uncharacterized protein LOC124654731 [Lolium rigidum] 0
TrEMBL A0A3B5Y728 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Paspalum vaginatum 1 gene-BS78_02G308400
Poaceae Puccinellia tenuiflora 1 Pt_Chr0200951
Poaceae Thinopyrum elongatum 5 Tel2E01G943800, Tel6E01G100500, Tel6E01G100700 ...
Tel6E01G107200, Tel6E01G107400
Poaceae Triticum dicoccoides 1 gene_TRIDC6BG006680
Poaceae Zea mays 1 Zm00001eb238320_P001
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.