HalophFGD

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Basic Information
Locus ID: Pt_Chr0200922
Species & Taxonomic ID: Puccinellia tenuiflora & 240906
Genome Assembly: GCA_012064385.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Chr02 22413502 22416080 - Pt_Chr0200922
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.14 51,940.79 Da 49.51 89.14 -0.09
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 50 108 2.94E-6 IPR036047
MobiDBLite mobidb-lite consensus disorder prediction 430 447 - -
MobiDBLite mobidb-lite consensus disorder prediction 407 464 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044417844.1 uncharacterized protein LOC123143098 [Triticum aestivum] 0
TrEMBL A0A453MTF1 F-box domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Puccinellia tenuiflora 2 Pt_Chr0200922, Pt_Chr0200926
Poaceae Thinopyrum elongatum 1 Tel6E01G081200
Poaceae Triticum aestivum 4 TraesCS6A02G039600.1, TraesCS6B02G040800.1 ...
TraesCS6D02G032400.1, TraesCSU02G079200.1
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