Basic Information
Locus ID:
Pt_Chr0200919
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 22400543 | 22403599 | + | Pt_Chr0200919 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 106,940.47 Da | 31.80 | 104.11 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 66 | 9.5E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 526 | 585 | 1.3E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 309 | 368 | 4.1E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 704 | 917 | 4.8E-43 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 73 | 394 | 1.8E-62 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 309 | 618 | 3.74E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 698 | 981 | 9.43E-67 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 142 | 1.1E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 356 | 621 | 6.0E-76 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 788 | 1001 | 3.0E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 251 | 354 | 3.1E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 149 | 250 | 3.0E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 702 | 787 | 8.1E-17 | - |
| SMART | SM00369 | LRR_typ_2 | 428 | 452 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 548 | 571 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 188 | 212 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 308 | 331 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 92 | 116 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 332 | 355 | 64.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 702 | 981 | 5.9E-26 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 260 | 284 | 27.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 702 | 988 | 35.990124 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 708 | 732 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 832 | 844 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_047078992.1 | MDIS1-interacting receptor like kinase 1-like [Lolium rigidum] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453MTN7 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology