Basic Information
Locus ID:
Pt_Chr0200908
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 21935898 | 21949083 | - | Pt_Chr0200908 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.17 | 70,089.33 Da | 34.28 | 93.97 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 28 | 114 | 1.71695E-20 | IPR001480 |
| Pfam | PF01453 | D-mannose binding lectin | 66 | 110 | 1.9E-9 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 369 | 597 | 1.4E-49 | IPR000719 |
| Pfam | PF00954 | S-locus glycoprotein domain | 123 | 234 | 6.0E-25 | IPR000858 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 67 | 130 | 8.77E-9 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 344 | 602 | 4.99E-73 | IPR011009 |
| Gene3D | G3DSA:2.90.10.10 | - | 16 | 135 | 2.0E-13 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 446 | 625 | 1.4E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 339 | 445 | 4.8E-34 | - |
| SMART | SM00108 | blect_4 | 25 | 121 | 1.7E-11 | IPR001480 |
| SMART | SM00220 | serkin_6 | 368 | 622 | 9.9E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 368 | 632 | 38.929996 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 19 | 146 | 13.310223 | IPR001480 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 490 | 502 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 374 | 406 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27290.2 | - | 0 |
| RefSeq | XP_044318561.1 | receptor-like serine/threonine-protein kinase SD1-8 [Triticum aestivum] | 0 |
| O81832 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 | 0 | |
| TrEMBL | A0A3B6DLD6 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Pt_Chr0200908.