Basic Information
Locus ID:
Pt_Chr0200804
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 19887550 | 19888813 | + | Pt_Chr0200804 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.14 | 43,570.28 Da | 52.42 | 78.22 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 2 | 35 | 4.0E-6 | IPR001810 |
| Pfam | PF07734 | F-box associated | 203 | 316 | 7.7E-8 | IPR006527 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 37 | 1.57E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 48 | 9.4E-8 | - |
| SMART | SM00256 | fbox_2 | 3 | 44 | 8.6E-8 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 96 | 318 | 1.8E-25 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1 | 45 | 9.92138 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051212838.1 | F-box protein At3g07870-like [Lolium perenne] | 0 |
| TrEMBL | A0A8I6X847 | F-box domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology