Basic Information
Locus ID:
Pt_Chr0108218
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 257406368 | 257413194 | + | Pt_Chr0108218 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 44,213.63 Da | 49.83 | 86.56 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 37 | 89 | 2.96085E-4 | - |
| Pfam | PF00651 | BTB/POZ domain | 34 | 103 | 1.9E-4 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 33 | 103 | 5.41E-5 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 19 | 150 | 1.8E-7 | IPR011333 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_047083119.1 | BTB/POZ domain-containing protein At2g46260-like isoform X3 [Lolium rigidum] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2S3GN45 | BTB domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G116800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0105998, Pt_Chr0108216, Pt_Chr0108218 |