Basic Information
Locus ID:
Pt_Chr0107891
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Short Name:
NIN1
Description:
Alkaline and neutral invertase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 246886830 | 246892466 | - | Pt_Chr0107891 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 72,223.99 Da | 51.75 | 92.76 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12899 | Alkaline and neutral invertase | 134 | 258 | 9.6E-45 | IPR024746 |
| Pfam | PF12899 | Alkaline and neutral invertase | 282 | 604 | 8.7E-166 | IPR024746 |
| SUPERFAMILY | SSF48208 | Six-hairpin glycosidases | 140 | 602 | 1.47E-50 | IPR008928 |
| Gene3D | G3DSA:1.50.10.10 | - | 284 | 595 | 3.0E-13 | IPR012341 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56560.1 | Plant neutral invertase family protein. | 0 |
| RefSeq | XP_044981741.1 | neutral/alkaline invertase 1, mitochondrial-like [Hordeum vulgare subsp. vulgare] | 0 |
| Q10MC0 | Neutral/alkaline invertase 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=NIN1 PE=1 SV=1 | 0 | |
| TrEMBL | F2DHA4 | Alkaline/neutral invertase OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology