Basic Information
Locus ID:
Pt_Chr0107683
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 239029367 | 239034733 | + | Pt_Chr0107683 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 78,274.63 Da | 43.64 | 85.66 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 42 | 82 | 9.5E-9 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 417 | 686 | 2.3E-37 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 134 | 192 | 3.6E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 41 | 254 | 2.04E-31 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 398 | 686 | 7.06E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 376 | 492 | 4.9E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 275 | 1.9E-41 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 494 | 712 | 3.1E-55 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 415 | 689 | 33.67215 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 158 | 179 | 7.496336 | IPR001611 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 24 | 7.0 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 205 | 227 | 7.758159 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 421 | 444 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 290 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14350.1 | STRUBBELIG-receptor family 7. | 0 |
| RefSeq | XP_047089656.1 | protein STRUBBELIG-RECEPTOR FAMILY 6-like [Lolium rigidum] | 0 |
| Q9LUL4 | Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana OX=3702 GN=SRF7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6HR36 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology