Basic Information
Locus ID:
Pt_Chr0107281
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
serine threonine-protein kinase ctr1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 227366574 | 227375037 | + | Pt_Chr0107281 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.38 | 86,343.60 Da | 59.49 | 72.96 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 527 | 737 | 6.60349E-101 | - |
| CDD | cd00130 | PAS | 114 | 216 | 2.2827E-13 | IPR000014 |
| Pfam | PF00989 | PAS fold | 110 | 215 | 1.6E-13 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 526 | 646 | 2.6E-29 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 459 | 736 | 6.56E-64 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 110 | 211 | 3.66E-21 | IPR035965 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 513 | 646 | 4.2E-36 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 115 | 220 | 1.8E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 647 | 751 | 4.2E-29 | - |
| SMART | SM00220 | serkin_6 | 485 | 745 | 6.5E-30 | IPR000719 |
| SMART | SM00091 | pas_2 | 105 | 172 | 1.3E-7 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 110 | 217 | 1.3E-14 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 110 | 174 | 15.704596 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 485 | 740 | 29.431948 | IPR000719 |
| ProSiteProfiles | PS50113 | PAC domain profile. | 176 | 228 | 8.567382 | IPR000700 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 627 | 639 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 340 | - | - |
| Coils | Coil | Coil | 35 | 55 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_051178177.1 | uncharacterized protein LOC127292759 [Lolium perenne] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6MXW8 | PAS domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology