Basic Information
Locus ID:
Pt_Chr0107253
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
serine threonine-protein kinase ctr1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 226722383 | 226730671 | + | Pt_Chr0107253 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 86,767.04 Da | 59.60 | 72.69 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 119 | 219 | 3.86959E-10 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 530 | 744 | 1.1099E-95 | - |
| Pfam | PF00989 | PAS fold | 115 | 218 | 3.9E-8 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 530 | 744 | 7.6E-47 | IPR001245 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 115 | 214 | 3.84E-16 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 462 | 744 | 1.73E-59 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 589 | 768 | 1.2E-42 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 121 | 223 | 1.5E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 515 | 588 | 2.1E-18 | - |
| SMART | SM00091 | pas_2 | 110 | 175 | 0.009 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 119 | 220 | 2.1E-10 | IPR000014 |
| ProSiteProfiles | PS50113 | PAC domain profile. | 179 | 231 | 8.567382 | IPR000700 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 134 | 177 | 10.586275 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 488 | 747 | 26.477942 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 343 | - | - |
| Coils | Coil | Coil | 40 | 60 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_051178177.1 | uncharacterized protein LOC127292759 [Lolium perenne] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6MXW8 | PAS domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology