Basic Information
Locus ID:
Pt_Chr0107185
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 225305356 | 225313011 | + | Pt_Chr0107185 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 145,618.47 Da | 54.47 | 79.58 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 100 | 420 | 1.5E-106 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 94 | 454 | 5.98E-116 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 88 | 432 | 1.4E-130 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 92 | 428 | 4.3E-153 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 94 | 420 | 112.830917 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 316 | 327 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 166 | 187 | 7.1E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 317 | 335 | 7.1E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 284 | 301 | 7.1E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 370 | 391 | 7.1E-41 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 818 | 837 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
| Coils | Coil | Coil | 434 | 454 | - | - |
| Coils | Coil | Coil | 975 | 995 | - | - |
| Coils | Coil | Coil | 1113 | 1147 | - | - |
| Coils | Coil | Coil | 1228 | 1248 | - | - |
| Coils | Coil | Coil | 735 | 762 | - | - |
| Coils | Coil | Coil | 561 | 585 | - | - |
| Coils | Coil | Coil | 595 | 615 | - | - |
| Coils | Coil | Coil | 1060 | 1087 | - | - |
| Coils | Coil | Coil | 845 | 879 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44050.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_051178290.1 | kinesin-like protein KIN-12G [Lolium perenne] | 0 |
| Q75LL2 | Kinesin-like protein KIN-12G OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12G PE=3 SV=1 | 0 | |
| TrEMBL | A0A453LSW4 | Kinesin motor domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology