Basic Information
Locus ID:
Pt_Chr0107123
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 223740991 | 223745487 | + | Pt_Chr0107123 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 42,185.59 Da | 26.30 | 77.68 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 86 | 350 | 6.29265E-109 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 81 | 349 | 6.6E-62 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 67 | 350 | 1.6E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 69 | 154 | 1.7E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 178 | 363 | 1.8E-60 | - |
| SMART | SM00220 | serkin_6 | 80 | 353 | 7.9E-57 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 23 | 362 | 1.2E-60 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 80 | 353 | 41.940536 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 217 | 229 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 277 | 299 | 8.9E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 321 | 343 | 8.9E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 173 | 186 | 8.9E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 211 | 229 | 8.9E-16 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_047092526.1 | serine/threonine-protein kinase STY13-like [Lolium rigidum] | 0 |
| Q9FGB1 | Serine/threonine-protein kinase 52 OS=Arabidopsis thaliana OX=3702 GN=CBC2 PE=1 SV=1 | 0 | |
| TrEMBL | F2E138 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology