Basic Information
Locus ID:
Pt_Chr0106761
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Phloem protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 214370798 | 214372356 | + | Pt_Chr0106761 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 29,834.11 Da | 52.48 | 70.83 | -0.48 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02230.1 | phloem protein 2-B1. | 0 |
| RefSeq | XP_047089067.1 | putative F-box protein PP2-B8 [Lolium rigidum] | 0 |
| Q6NPT8 | F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453MKX3 | Phloem protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0106752, Pt_Chr0106754, Pt_Chr0106757, Pt_Chr0106761 ... |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5BG082740 |