Basic Information
Locus ID:
Pt_Chr0106605
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 210839010 | 210844176 | - | Pt_Chr0106605 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 85,383.72 Da | 34.00 | 79.17 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 474 | 606 | 5.07061E-36 | IPR033734 |
| CDD | cd09612 | Jacalin | 637 | 772 | 1.06582E-31 | IPR033734 |
| CDD | cd09612 | Jacalin | 317 | 451 | 6.70521E-38 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 318 | 453 | 3.8E-19 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 478 | 608 | 2.5E-20 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 653 | 772 | 6.6E-17 | IPR001229 |
| Pfam | PF00069 | Protein kinase domain | 19 | 290 | 1.7E-51 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 290 | 4.18E-67 | IPR011009 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 462 | 608 | 3.4E-39 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 305 | 454 | 2.75E-37 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 624 | 771 | 4.58E-37 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 306 | 453 | 1.8E-41 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 626 | 772 | 9.6E-40 | IPR036404 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 110 | 305 | 5.6E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 4 | 92 | 2.6E-23 | - |
| Gene3D | G3DSA:2.100.10.30 | - | 454 | 607 | 6.5E-44 | IPR036404 |
| SMART | SM00220 | serkin_6 | 18 | 303 | 2.5E-42 | IPR000719 |
| SMART | SM00915 | Jacalin_2 | 317 | 454 | 5.9E-10 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 636 | 773 | 6.3E-5 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 474 | 609 | 1.0E-11 | IPR001229 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 18 | 302 | 37.205647 | IPR000719 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 306 | 454 | 32.900173 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 626 | 773 | 27.516514 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 463 | 609 | 32.421837 | IPR001229 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 150 | 162 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 24 | 47 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21410.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 29. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_047052550.1 | mannose/glucose-specific lectin-like isoform X1 [Lolium rigidum] | 0 |
| Q8W4G6 | Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana OX=3702 GN=CRK15 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0E0BL32 | Protein kinase domain-containing protein OS=Oryza glumipatula OX=40148 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology