Basic Information
Locus ID:
Pt_Chr0106588
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 210486109 | 210488436 | - | Pt_Chr0106588 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 63,523.63 Da | 35.66 | 86.53 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 207 | 239 | 1.40617E-8 | - |
| Pfam | PF07645 | Calcium-binding EGF domain | 207 | 249 | 3.8E-8 | IPR001881 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 317 | 576 | 8.8E-42 | IPR001245 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 203 | 251 | 5.37E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 319 | 578 | 1.75E-61 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 210 | 252 | 6.1E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 303 | 384 | 7.4E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 385 | 585 | 3.7E-53 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 165 | 209 | 2.8E-5 | - |
| SMART | SM00181 | egf_5 | 168 | 206 | 13.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 210 | 250 | 0.0057 | IPR000742 |
| SMART | SM00220 | serkin_6 | 316 | 580 | 3.0E-24 | IPR000719 |
| SMART | SM00179 | egfca_6 | 207 | 250 | 3.0E-9 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 316 | 580 | 32.541428 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 207 | 243 | 11.784428 | IPR000742 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 431 | 443 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 207 | 234 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 225 | 236 | - | IPR000152 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 322 | 344 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_044361219.1 | wall-associated receptor kinase 1-like [Triticum aestivum] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7S9C0X0 | SnTox1 sensitivity protein OS=Triticum turgidum subsp. durum OX=4567 GN=Snn1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology