Basic Information
Locus ID:
Pt_Chr0106556
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 209640502 | 209641614 | - | Pt_Chr0106556 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 38,303.80 Da | 36.04 | 100.56 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 68 | 321 | 1.5E-26 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 66 | 323 | 4.55E-51 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 127 | 329 | 1.6E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 54 | 126 | 3.4E-6 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 24 | 330 | 24.725325 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08590.1 | Leucine-rich receptor-like protein kinase family protein. similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888) | 0 |
| RefSeq | XP_048542572.1 | MDIS1-interacting receptor like kinase 1-like [Triticum urartu] | 0 |
| Q9FRS6 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana OX=3702 GN=PXL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7QUK0 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 4 | HORVU.MOREX.r3.7HG0635480.1, HORVU.MOREX.r3.7HG0635490.1 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_033605 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g13410.1 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0106556 |
| Poaceae | Thinopyrum elongatum | 4 | Tel2E01G968400, Tel4E01G639600, Tel7E01G030800 ... |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC3BG001000, gene_TRIDC4AG061310 ... |
| Poaceae | Triticum aestivum | 23 | TraesCS3A02G404900.1.cds1, TraesCS3B02G005600.1 ... |