Basic Information
Locus ID:
Pt_Chr0106362
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 204169663 | 204169959 | - | Pt_Chr0106362 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.35 | 10,502.53 Da | 63.27 | 91.63 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_047088262.1 | uncharacterized protein LOC124700127 [Lolium rigidum] | 0 |
| TrEMBL | A0A453D423 | DUF1618 domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | BH04.174, BH05.115, CH04.186, CH05.176 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0198350.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G030800 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0106362 |
| Poaceae | Thinopyrum elongatum | 5 | Tel1E01G388100, Tel2E01G801100, Tel2E01G802400 ... |
| Poaceae | Triticum dicoccoides | 11 | gene_TRIDC1AG034980, gene_TRIDC1BG040330 ... |
| Poaceae | Triticum aestivum | 18 | TraesCS1A02G232300.1, TraesCS1A02G232400.1 ... |