Basic Information
Locus ID:
Pt_Chr0106279
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Epidermal growth factor-like domain.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 202271810 | 202273714 | - | Pt_Chr0106279 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 33,179.48 Da | 36.27 | 93.45 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 209 | 252 | 4.7E-6 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 209 | 256 | 1.01E-13 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 183 | 290 | 3.0E-15 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37790.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_037444412.1 | wall-associated receptor kinase-like 6 [Triticum dicoccoides] | 0 |
| Q9FLJ8 | Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana OX=3702 GN=At5g61350 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453MFQ3 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 6 | AH01.3275, BH01.3663, CH01.3846, CH01.3847, CH02.1873 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0531690.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_059598, gene-QYE76_060264 |
| Poaceae | Oryza coarctata | 3 | Oco01G010200, Oco05G028540, Oco06G029580 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g62430.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G320700 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0105226, Pt_Chr0106279 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G818100 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG052310, gene_TRIDC5BG078330 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G347600.1, TraesCS5B02G526000.1 ... |