Basic Information
Locus ID:
Pt_Chr0106209
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 200999188 | 201000367 | + | Pt_Chr0106209 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 41,810.61 Da | 67.01 | 105.98 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 60 | 1.44E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 160 | 353 | 3.37E-14 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 64 | 9.3E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 158 | 360 | 1.6E-15 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 9 | 62 | 9.338503 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59190.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_051221518.1 | MEIOTIC F-BOX protein MOF-like [Lolium perenne] | 0 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6PRR8 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology