Basic Information
Locus ID:
Pt_Chr0106193
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 200615024 | 200619856 | + | Pt_Chr0106193 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 98,387.07 Da | 51.17 | 72.57 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 573 | 771 | 2.0E-43 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 45 | 145 | 2.51E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 551 | 842 | 1.19E-69 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 44 | 158 | 2.1E-5 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 645 | 855 | 6.1E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 543 | 644 | 1.1E-24 | - |
| SMART | SM00220 | serkin_6 | 570 | 826 | 4.1E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 570 | 836 | 35.142082 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 576 | 598 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 690 | 702 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 891 | 914 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 440 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 894 | 914 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 252 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 497 | 524 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 425 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77280.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_051177150.1 | uncharacterized protein LOC127291870 [Lolium perenne] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6I155 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.2862.V1.1 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.522, BH01.211, CH01.54 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0208960, gene-QOZ80_3BG0254090 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0531390.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_060288, gene-QYE76_060318 |
| Poaceae | Oryza coarctata | 2 | Oco05G028500, Oco06G029540 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g62340.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G016700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0106193 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr01G000760, Chr04G032270, Chr07G031320, Chr12G032230 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G807200 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG052760, gene_TRIDC5BG077700 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G351900.1, TraesCS5B02G521500.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb063970_P001, Zm00001eb211040_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-15618, nbis-gene-16707, nbis-gene-56167 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g2405, Zma_g83 |