Basic Information
Locus ID:
Pt_Chr0106191
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Calcium-binding EGF-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 200568674 | 200575822 | + | Pt_Chr0106191 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.90 | 122,867.57 Da | 39.36 | 82.19 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 216 | 335 | 6.8E-17 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 714 | 995 | 1.3E-37 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 697 | 995 | 3.64E-61 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 177 | 405 | 1.12E-39 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 790 | 1005 | 3.9E-40 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 688 | 789 | 3.7E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 175 | 432 | 3.1E-37 | - |
| SMART | SM00220 | serkin_6 | 714 | 998 | 1.9E-19 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 65 | 414 | 18.068213 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 714 | 998 | 31.693388 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 836 | 848 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1057 | 1112 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1057 | 1076 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21230.1 | wall associated kinase 5. encodes a wall-associated kinase | 0 |
| RefSeq | XP_048572788.1 | wall-associated receptor kinase 5-like [Triticum urartu] | 0 |
| Q9LMN7 | Wall-associated receptor kinase 5 OS=Arabidopsis thaliana OX=3702 GN=WAK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0JCF1 | Protein kinase domain-containing protein OS=Oryza nivara OX=4536 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0106187, Pt_Chr0106191 |