Basic Information
Locus ID:
Pt_Chr0106187
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Calcium-binding EGF-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 200368784 | 200375871 | + | Pt_Chr0106187 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.59 | 118,404.02 Da | 39.57 | 84.64 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 197 | 385 | 1.6E-21 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 663 | 944 | 3.4E-36 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 646 | 944 | 7.15E-60 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 158 | 391 | 1.08E-44 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 739 | 954 | 8.6E-39 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 637 | 738 | 7.1E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 156 | 415 | 2.6E-43 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 16 | 400 | 21.644114 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 663 | 947 | 30.930151 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1006 | 1025 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1006 | 1061 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21230.1 | wall associated kinase 5. encodes a wall-associated kinase | 0 |
| RefSeq | XP_048572788.1 | wall-associated receptor kinase 5-like [Triticum urartu] | 0 |
| Q9LMN7 | Wall-associated receptor kinase 5 OS=Arabidopsis thaliana OX=3702 GN=WAK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0E0JCF0 | Protein kinase domain-containing protein OS=Oryza nivara OX=4536 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0106187, Pt_Chr0106191 |