Basic Information
Locus ID:
Pt_Chr0106148
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Domain of unknown function
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 199204211 | 199205529 | - | Pt_Chr0106148 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.00 | 43,303.38 Da | 45.58 | 86.54 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03478 | Protein of unknown function (DUF295) | 284 | 321 | 7.0E-9 | IPR005174 |
| SUPERFAMILY | SSF81383 | F-box domain | 24 | 72 | 5.23E-7 | IPR036047 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 22 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051228855.1 | uncharacterized protein LOC127346611 [Lolium perenne] | 0 |
| TrEMBL | A0A3B6LXG1 | DUF295 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 6 | HORVU.MOREX.r3.2HG0105960.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 23 | gene-QYE76_005955, gene-QYE76_007209, gene-QYE76_007223 ... |
| Poaceae | Oryza coarctata | 1 | Oco01G030920 |
| Poaceae | Puccinellia tenuiflora | 29 | Pt_Chr0106145, Pt_Chr0106146, Pt_Chr0106147, Pt_Chr0106148 ... |
| Poaceae | Thinopyrum elongatum | 5 | Tel2E01G714100, Tel3E01G083700, Tel3E01G849800 ... |
| Poaceae | Triticum dicoccoides | 16 | gene_TRIDC2AG006540, gene_TRIDC2BG007550 ... |
| Poaceae | Triticum aestivum | 22 | TraesCS2A02G419700.1.cds1, TraesCS2B02G438800.1.cds1 ... |