halophFGD

Basic Information

Locus ID: Pt_Chr0105998

Species & Taxonomic ID: Puccinellia tenuiflora & 240906

Genome Assembly: GCA_012064385.1

Description: domain-containing protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr01	195495713	195505974	+	Pt_Chr0105998

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.67	94,965.41 Da	48.28	89.01	0.01

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd18186	BTB_POZ_ZBTB_KLHL-like	28	95	2.00722E-13	-
Pfam	PF00651	BTB/POZ domain	28	109	2.5E-13	IPR000210
Pfam	PF07707	BTB And C-terminal Kelch	561	654	2.5E-6	IPR011705
SUPERFAMILY	SSF54695	POZ domain	28	109	9.94E-13	IPR011333
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	3	154	1.4E-16	IPR011333
Gene3D	G3DSA:1.25.40.420	-	572	679	7.0E-10	-
SMART	SM00875	BACK_2	554	657	4.1E-4	IPR011705
SMART	SM00225	BTB_4	17	112	9.8E-5	IPR000210
ProSiteProfiles	PS50097	BTB domain profile.	28	81	12.536337	IPR000210
MobiDBLite	mobidb-lite	consensus disorder prediction	442	461	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G61600.1	POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1
RefSeq	XP_047071334.1	BTB/POZ domain-containing protein POB1-like [Lolium rigidum]
Swiss-Prot	Q9FPW6	BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2
TrEMBL	M8B568	Kelch-like protein 17 OS=Aegilops tauschii OX=37682 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0105998, Pt_Chr0108216, Pt_Chr0108218