Basic Information
Locus ID:
Pt_Chr0105994
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 195380971 | 195384241 | + | Pt_Chr0105994 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.31 | 52,611.11 Da | 45.29 | 81.42 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 16 | 55 | 3.9E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 14 | 74 | 2.22E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 9 | 59 | 1.0E-6 | - |
| SMART | SM00256 | fbox_2 | 16 | 57 | 4.6E-4 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 478 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 456 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044360982.1 | uncharacterized protein LOC123082803 [Triticum aestivum] | 0 |
| TrEMBL | A0A8I7BFU3 | F-box domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0105994, Pt_Chr0108210, Pt_Chr0108213 |