Basic Information
Locus ID:
Pt_Chr0105950
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Tetratricopeptide repeat (TPR)-like superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 194476415 | 194479398 | - | Pt_Chr0105950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.64 | 62,804.14 Da | 43.61 | 89.37 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048574235.1 | uncharacterized protein LOC125554897 [Triticum urartu] | 0 |
| TrEMBL | M8BKY1 | CPSF_A domain-containing protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0105908, Pt_Chr0105944, Pt_Chr0105950 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G780500 |
| Poaceae | Triticum aestivum | 2 | TraesCS4A02G366900.1, TraesCS5B02G505700.1 |