Basic Information
Locus ID:
Pt_Chr0105931
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 193668332 | 193671751 | + | Pt_Chr0105931 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.80 | 43,997.93 Da | 29.35 | 90.38 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 69 | 336 | 1.98473E-94 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 67 | 264 | 3.8E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 46 | 335 | 5.93E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 139 | 353 | 7.4E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 35 | 138 | 2.2E-35 | - |
| SMART | SM00220 | serkin_6 | 63 | 301 | 1.9E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 63 | 340 | 36.456547 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 69 | 91 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 185 | 197 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 365 | 397 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16670.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_024311498.1 | cold-responsive protein kinase 1 isoform X1 [Brachypodium distachyon] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0Q3H8U2 | Protein kinase domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100844840 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology