HalophFGD

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Basic Information
Locus ID: Pt_Chr0105908
Species & Taxonomic ID: Puccinellia tenuiflora & 240906
Genome Assembly: GCA_012064385.1
Description: F-box-like
Maps and Mapping Data
Chromosome Start End Strand ID
Chr01 193148254 193150740 - Pt_Chr0105908
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.60 55,968.80 Da 46.93 83.45 -0.12
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 17 58 1.4E-4 IPR001810
SUPERFAMILY SSF81383 F-box domain 11 84 2.49E-10 IPR036047
MobiDBLite mobidb-lite consensus disorder prediction 397 418 - -
MobiDBLite mobidb-lite consensus disorder prediction 399 417 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_051177320.1 uncharacterized protein LOC127292012 [Lolium perenne] 0
TrEMBL A0A3B6LVN9 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Puccinellia tenuiflora 3 Pt_Chr0105908, Pt_Chr0105944, Pt_Chr0105950
Poaceae Thinopyrum elongatum 1 Tel5E01G780500
Poaceae Triticum aestivum 2 TraesCS4A02G366900.1, TraesCS5B02G505700.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.