Basic Information
Locus ID:
Pt_Chr0105032
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 168515864 | 168518687 | + | Pt_Chr0105032 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.29 | 69,654.91 Da | 51.24 | 89.67 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 383 | 497 | 2.3E-11 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 72 | 3.4E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 125 | 184 | 7.0E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 56 | 223 | 2.09E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 384 | 496 | 1.32E-21 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 192 | 2.9E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 194 | 236 | 6.7E-6 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 543 | 651 | 4.6E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 370 | 510 | 1.2E-22 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 380 | 661 | 11.199088 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 269 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 661 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 259 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_044979999.1 | probable inactive receptor kinase At1g48480 [Hordeum vulgare subsp. vulgare] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I6XEY0 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology