Basic Information
Locus ID:
Pt_Chr0104943
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Short Name:
CPK30
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 166099387 | 166103494 | + | Pt_Chr0104943 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 63,119.45 Da | 38.05 | 80.21 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 86 | 345 | 1.38012E-119 | - |
| CDD | cd00051 | EFh | 394 | 453 | 4.57091E-14 | IPR002048 |
| CDD | cd00051 | EFh | 465 | 527 | 3.09108E-15 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 464 | 527 | 1.8E-11 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 87 | 346 | 1.5E-67 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 392 | 454 | 6.4E-11 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 374 | 554 | 1.46E-41 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 83 | 347 | 4.05E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 355 | 530 | 3.2E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 174 | 354 | 1.2E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 89 | 173 | 1.3E-21 | - |
| SMART | SM00054 | efh_1 | 465 | 493 | 0.1 | IPR002048 |
| SMART | SM00054 | efh_1 | 501 | 529 | 5.7E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 393 | 421 | 0.0011 | IPR002048 |
| SMART | SM00054 | efh_1 | 429 | 457 | 0.013 | IPR002048 |
| SMART | SM00220 | serkin_6 | 87 | 346 | 9.5E-92 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 87 | 346 | 47.18425 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 425 | 460 | 10.887003 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 461 | 496 | 11.919133 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 497 | 532 | 13.118635 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 389 | 424 | 13.369694 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 474 | 486 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 510 | 522 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 208 | 220 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 93 | 117 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 438 | 450 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_047092118.1 | calcium-dependent protein kinase 9-like [Lolium rigidum] | 0 |
| Q6AVI8 | Calcium-dependent protein kinase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6JCC4 | Calcium-dependent protein kinase 30 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology