Basic Information
Locus ID:
Pt_Chr0104935
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Short Name:
CPK30
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 165873854 | 165878143 | - | Pt_Chr0104935 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 64,109.54 Da | 38.08 | 79.60 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 473 | 535 | 2.73554E-15 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 94 | 353 | 1.80256E-119 | - |
| CDD | cd00051 | EFh | 402 | 461 | 3.96663E-14 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 95 | 354 | 1.5E-67 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 472 | 535 | 1.9E-11 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 400 | 462 | 6.5E-11 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 382 | 562 | 1.56E-41 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 91 | 355 | 4.32E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 182 | 362 | 1.3E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 363 | 538 | 3.3E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 97 | 181 | 1.3E-21 | - |
| SMART | SM00054 | efh_1 | 509 | 537 | 5.7E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 401 | 429 | 0.0011 | IPR002048 |
| SMART | SM00054 | efh_1 | 437 | 465 | 0.013 | IPR002048 |
| SMART | SM00054 | efh_1 | 473 | 501 | 0.1 | IPR002048 |
| SMART | SM00220 | serkin_6 | 95 | 354 | 9.5E-92 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 95 | 354 | 47.18425 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 505 | 540 | 13.118635 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 469 | 504 | 11.919133 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 433 | 468 | 10.887003 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 397 | 432 | 13.369694 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 101 | 125 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 482 | 494 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 216 | 228 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 518 | 530 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 446 | 458 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 47 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_051178975.1 | calcium-dependent protein kinase 9-like isoform X3 [Lolium perenne] | 0 |
| Q6AVI8 | Calcium-dependent protein kinase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6I184 | Calcium-dependent protein kinase 30 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology