Basic Information
Locus ID:
Pt_Chr0104722
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Calcium-dependent channel, 7TM region, putative phosphate
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 159658903 | 159666350 | + | Pt_Chr0104722 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.22 | 85,825.64 Da | 44.10 | 106.67 | 0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 162 | 2.5E-36 | IPR032880 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 353 | 619 | 1.9E-71 | IPR003864 |
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 186 | 342 | 6.5E-21 | IPR027815 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 703 | 733 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 703 | 719 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G10090.1 | Early-responsive to dehydration stress protein (ERD4). | 0 |
| RefSeq | XP_047092018.1 | CSC1-like protein RXW8 [Lolium rigidum] | 0 |
| Q94A87 | CSC1-like protein At1g10090 OS=Arabidopsis thaliana OX=3702 GN=At1g10090 PE=1 SV=1 | 0 | |
| TrEMBL | I1GPN1 | CSC1-like protein RXW8 OS=Brachypodium distachyon OX=15368 GN=100822705 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology