Basic Information
Locus ID:
Pt_Chr0103580
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the ubiquitin-activating E1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 119601959 | 119608537 | + | Pt_Chr0103580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 130,608.37 Da | 38.16 | 84.42 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01490 | Ube1_repeat2 | 589 | 1129 | 0.0 | - |
| CDD | cd01491 | Ube1_repeat1 | 172 | 557 | 9.70828E-156 | - |
| Pfam | PF00899 | ThiF family | 174 | 549 | 1.3E-29 | IPR000594 |
| Pfam | PF09358 | Ubiquitin fold domain | 1082 | 1171 | 6.2E-25 | IPR018965 |
| Pfam | PF00899 | ThiF family | 570 | 1070 | 1.7E-76 | IPR000594 |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 419 | 488 | 8.0E-22 | IPR032420 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 757 | 1011 | 4.0E-82 | IPR019572 |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 347 | 417 | 1.8E-27 | IPR032418 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 564 | 1066 | 1.31E-130 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 166 | 554 | 5.76E-103 | IPR035985 |
| Gene3D | G3DSA:3.10.290.60 | - | 1084 | 1174 | 6.2E-23 | IPR038252 |
| Gene3D | G3DSA:3.40.50.12550 | - | 292 | 580 | 6.4E-110 | - |
| Gene3D | G3DSA:3.50.50.80 | - | 163 | 281 | 2.3E-38 | IPR042449 |
| Gene3D | G3DSA:1.10.10.2660 | - | 742 | 1018 | 1.5E-190 | IPR042063 |
| Gene3D | G3DSA:2.40.30.180 | - | 335 | 416 | 6.4E-110 | IPR042302 |
| Gene3D | G3DSA:3.40.50.720 | - | 590 | 1069 | 1.5E-190 | - |
| SMART | SM00985 | UBA_e1_C_a_2 | 1049 | 1171 | 1.8E-50 | IPR018965 |
| TIGRFAM | TIGR01408 | Ube1: ubiquitin-activating enzyme E1 | 167 | 1176 | 0.0 | IPR018075 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 532 | 540 | - | IPR018074 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 749 | 757 | - | IPR033127 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 617 | 640 | 8.8E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 194 | 218 | 8.8E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 818 | 845 | 8.8E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 309 | 336 | 8.8E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 664 | 689 | 8.8E-66 | IPR000011 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 80 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06460.1 | ubiquitin activating enzyme 2. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. | 0 |
| RefSeq | XP_051180530.1 | ubiquitin-activating enzyme E1 2-like [Lolium perenne] | 0 |
| P20973 | Ubiquitin-activating enzyme E1 1 OS=Triticum aestivum OX=4565 GN=UBA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453HSE7 | E1 ubiquitin-activating enzyme OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology