Basic Information
Locus ID:
Pt_Chr0103577
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein FAR1-RELATED SEQUENCE
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 119536297 | 119545627 | + | Pt_Chr0103577 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 98,556.54 Da | 47.65 | 77.63 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10551 | MULE transposase domain | 371 | 464 | 3.3E-24 | IPR018289 |
| Pfam | PF03101 | FAR1 DNA-binding domain | 170 | 249 | 1.3E-11 | IPR004330 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 757 | 868 | 2.35E-7 | IPR035985 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 106 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38180.1 | FAR1-related sequence 5. | 0 |
| RefSeq | XP_044455925.1 | protein FAR1-RELATED SEQUENCE 5-like [Triticum aestivum] | 0 |
| Q9SZL8 | Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7VCL2 | SWIM-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology