Basic Information
Locus ID:
Pt_Chr0103469
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
serine threonine-protein kinase ctr1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 116129433 | 116136264 | + | Pt_Chr0103469 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 81,746.85 Da | 53.54 | 74.84 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 94 | 195 | 4.86881E-11 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 460 | 706 | 9.12444E-126 | - |
| Pfam | PF00989 | PAS fold | 86 | 191 | 2.3E-10 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 454 | 706 | 3.2E-68 | IPR001245 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 90 | 191 | 1.1E-18 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 418 | 706 | 6.47E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 95 | 197 | 1.8E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 532 | 735 | 9.0E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 447 | 531 | 6.5E-31 | - |
| SMART | SM00220 | serkin_6 | 454 | 713 | 4.3E-60 | IPR000719 |
| SMART | SM00091 | pas_2 | 85 | 152 | 1.7E-6 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 87 | 191 | 1.2E-13 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 83 | 154 | 14.738874 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 454 | 715 | 44.767338 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 573 | 585 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 567 | 585 | 5.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 528 | 541 | 5.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 633 | 655 | 5.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 614 | 624 | 5.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 677 | 699 | 5.4E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 55 | - | - |
| Coils | Coil | Coil | 3 | 23 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_051180383.1 | uncharacterized protein LOC127294576 [Lolium perenne] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | W5EQI7 | PAS domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology