Basic Information
Locus ID:
Pt_Chr0103436
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 114421409 | 114429630 | + | Pt_Chr0103436 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 47,122.81 Da | 39.59 | 90.96 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 252 | 404 | 5.2E-25 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 259 | 411 | 1.75E-35 | IPR011009 |
| Gene3D | G3DSA:1.20.930.20 | - | 22 | 139 | 4.4E-23 | IPR036537 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 250 | 415 | 1.3E-41 | - |
| SMART | SM00220 | serkin_6 | 170 | 389 | 5.2E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 108 | 396 | 19.552282 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 261 | 273 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23240.2 | - | 0 |
| RefSeq | XP_047089715.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 [Lolium rigidum] | 0 |
| Q3E9X6 | Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana OX=3702 GN=CRK21 PE=2 SV=1 | 0 | |
| TrEMBL | A0A811QI73 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS39356 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH05.3360, CH04.2550 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_9AG0692060, gene-QOZ80_9AG0692200 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0642600.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_065633, gene-QYE76_065634 |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_05G234100, gene-BS78_K259400, gene-BS78_K259700 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0103436, Pt_Chr0103449 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr0G006690, Chr23G019530 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G121900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG064110, gene_TRIDC7AG005940 |
| Poaceae | Triticum aestivum | 2 | TraesCS4A02G433800.1, TraesCS7A02G056800.1 |
| Poaceae | Zea mays | 1 | Zm00001eb165320_P001 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g19130, Zma_g19133 |