Basic Information
Locus ID:
Pt_Chr0103372
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 110121603 | 110126078 | + | Pt_Chr0103372 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 78,463.54 Da | 48.68 | 86.30 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 506 | 542 | 3.5E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 209 | 391 | 1.12E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 4 | 42 | 1.44E-7 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 505 | 555 | 1.01E-9 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 201 | 526 | 2.0E-8 | IPR032675 |
| SMART | SM00256 | fbox_2 | 510 | 550 | 0.065 | IPR001810 |
| SMART | SM00256 | fbox_2 | 11 | 51 | 49.0 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 504 | 551 | 9.576953 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G42720.1 | FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein. | 0 |
| RefSeq | XP_051181309.1 | F-box/FBD/LRR-repeat protein At5g22660-like [Lolium perenne] | 0 |
| Q6DR13 | F-box/LRR-repeat protein At2g42720 OS=Arabidopsis thaliana OX=3702 GN=At2g42720 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6GYR8 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology