Basic Information
Locus ID:
Pt_Chr0103208
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 103371420 | 103374923 | - | Pt_Chr0103208 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.69 | 79,014.09 Da | 45.50 | 89.65 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 542 | 646 | 9.41515E-44 | - |
| CDD | cd00121 | MATH | 390 | 510 | 1.84211E-10 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 189 | 300 | 9.84936E-48 | - |
| CDD | cd00121 | MATH | 45 | 163 | 6.8535E-7 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 537 | 647 | 5.1E-27 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 191 | 300 | 2.5E-24 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 527 | 647 | 5.16E-32 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 40 | 168 | 2.29E-10 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 389 | 516 | 3.92E-16 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 178 | 301 | 4.32E-31 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 304 | 379 | 1.2E-19 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 43 | 167 | 2.5E-8 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 176 | 298 | 1.7E-37 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 522 | 644 | 2.2E-38 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 388 | 514 | 3.9E-13 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 650 | 716 | 4.6E-15 | - |
| SMART | SM00225 | BTB_4 | 546 | 650 | 1.1E-24 | IPR000210 |
| SMART | SM00225 | BTB_4 | 200 | 304 | 1.2E-22 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 546 | 613 | 19.38208 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 385 | 509 | 8.705681 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 200 | 267 | 17.996386 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.1 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_044424668.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum aestivum] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | M7YQN2 | BTB/POZ and MATH domain-containing protein 1 OS=Triticum urartu OX=4572 GN=TRIUR3_11315 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology