Basic Information
Locus ID:
Pt_Chr0103207
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 103350622 | 103351776 | + | Pt_Chr0103207 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 41,882.36 Da | 38.52 | 91.17 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 193 | 308 | 2.41209E-46 | - |
| Pfam | PF00651 | BTB/POZ domain | 198 | 308 | 1.5E-23 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 187 | 309 | 8.24E-29 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 81 | 174 | 1.8E-7 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 311 | 383 | 3.0E-19 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 183 | 304 | 6.4E-37 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 15 | 174 | 9.9E-10 | IPR008974 |
| SMART | SM00225 | BTB_4 | 207 | 311 | 4.0E-19 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 207 | 274 | 16.920921 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_051201186.1 | BTB/POZ and MATH domain-containing protein 1-like [Lolium perenne] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6RQN9 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology